Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 GCSHP5-201ENST00000443090 522 ntBASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AL158047.1-201ENST00000445918 881 ntBASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AC073648.6-201ENST00000641589 218 ntBASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AC092368.3-202ENST00000574180 1591 ntBASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 PNMA6B-201ENST00000538162 1200 ntBASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 AP006294.2-201ENST00000641667 209 ntBASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRIT1Q9P2V4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 AC008403.3-201ENST00000598924 454 ntBASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.92■□□□□ 0.78
LRIT1Q9P2V4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 UNC93B4-201ENST00000505679 747 ntBASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRIT1Q9P2V4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRIT1Q9P2V4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
LRIT1Q9P2V4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms