Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
LRFN1Q9P244 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN1Q9P244 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRFN1Q9P244 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 AC244015.2-201ENST00000616358 1861 ntBASIC18.88■□□□□ 0.61
LRFN1Q9P244 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN1Q9P244 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRFN1Q9P244 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRFN1Q9P244 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.87■□□□□ 0.61
LRFN1Q9P244 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRFN1Q9P244 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRFN1Q9P244 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.87■□□□□ 0.61
LRFN1Q9P244 EP400NL-214ENST00000641289 2402 ntBASIC18.86■□□□□ 0.61
LRFN1Q9P244 FBXW4P1-201ENST00000426721 2239 ntBASIC18.86■□□□□ 0.61
LRFN1Q9P244 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 KRT18P29-201ENST00000397031 1267 ntBASIC18.86■□□□□ 0.61
LRFN1Q9P244 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRFN1Q9P244 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.86■□□□□ 0.61
LRFN1Q9P244 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 ESRRAP1-201ENST00000400596 1257 ntBASIC18.85■□□□□ 0.61
LRFN1Q9P244 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms