Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 AF213884.3-201ENST00000563833 479 ntBASIC19.44■□□□□ 0.7
VAPAQ9P0L0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
VAPAQ9P0L0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 AL355001.2-201ENST00000620617 1191 ntBASIC19.43■□□□□ 0.7
VAPAQ9P0L0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 AC008406.3-201ENST00000620001 1374 ntBASIC19.43■□□□□ 0.7
VAPAQ9P0L0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 AC092720.2-201ENST00000602388 1665 ntBASIC19.43■□□□□ 0.7
VAPAQ9P0L0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAPAQ9P0L0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAPAQ9P0L0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 AC091305.1-201ENST00000479476 895 ntBASIC19.41■□□□□ 0.7
VAPAQ9P0L0 RARRES2P11-201ENST00000635158 484 ntBASIC19.41■□□□□ 0.7
VAPAQ9P0L0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAPAQ9P0L0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.4■□□□□ 0.7
VAPAQ9P0L0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 AL031432.3-201ENST00000607698 485 ntBASIC19.4■□□□□ 0.7
VAPAQ9P0L0 AC110285.6-201ENST00000617652 491 ntBASIC19.4■□□□□ 0.7
VAPAQ9P0L0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 AL136967.2-201ENST00000623968 743 ntBASIC19.4■□□□□ 0.7
VAPAQ9P0L0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
VAPAQ9P0L0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms