Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 KRT87P-202ENST00000534226 1464 ntBASIC18.65■□□□□ 0.58
NPAP1Q9NZP6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.64■□□□□ 0.58
NPAP1Q9NZP6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.64■□□□□ 0.58
NPAP1Q9NZP6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 KRT19P1-201ENST00000405746 1186 ntBASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 AC090192.1-201ENST00000517740 490 ntBASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAP1Q9NZP6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NPAP1Q9NZP6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 AC016769.1-201ENST00000409132 1010 ntBASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAP1Q9NZP6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 AL034346.1-201ENST00000568244 1277 ntBASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 AC104187.1-201ENST00000607510 612 ntBASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NPAP1Q9NZP6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms