Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 AC100791.3-201ENST00000617619 330 ntBASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 CYP21A1P-202ENST00000354927 1481 ntBASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 PLK5-205ENST00000642079 1969 ntBASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 CYP2T3P-201ENST00000601990 817 ntBASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
SPHK1Q9NYA1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SPHK1Q9NYA1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPHK1Q9NYA1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPHK1Q9NYA1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.83■□□□□ 0.76
SPHK1Q9NYA1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SPHK1Q9NYA1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 KRT17P1-201ENST00000399211 1546 ntBASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPHK1Q9NYA1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPHK1Q9NYA1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPHK1Q9NYA1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 AC069152.1-201ENST00000438030 544 ntBASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.79■□□□□ 0.76
SPHK1Q9NYA1 AC092118.2-201ENST00000613495 667 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms