Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 AC027702.1-201ENST00000563810 1770 ntBASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN4Q9NRR5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 AC231657.2-201ENST00000624556 255 ntBASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN4Q9NRR5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
UBQLN4Q9NRR5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBQLN4Q9NRR5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBQLN4Q9NRR5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBQLN4Q9NRR5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBQLN4Q9NRR5 AC007225.1-201ENST00000566331 1836 ntBASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 CNN2P6-201ENST00000439038 900 ntBASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 FAM21FP-204ENST00000608637 956 ntBASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 IKBKGP1-201ENST00000612193 1073 ntBASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 AC092437.1-201ENST00000624794 1048 ntBASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBQLN4Q9NRR5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBQLN4Q9NRR5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms