Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 GUSBP5-201ENST00000418136 578 ntBASIC18.62■□□□□ 0.57
HMG20AQ9NP66 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMG20AQ9NP66 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMG20AQ9NP66 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 AC004687.1-201ENST00000579003 1625 ntBASIC18.6■□□□□ 0.57
HMG20AQ9NP66 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20AQ9NP66 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 AC241377.3-202ENST00000626088 1088 ntBASIC18.59■□□□□ 0.57
HMG20AQ9NP66 AC241585.3-202ENST00000628937 1088 ntBASIC18.59■□□□□ 0.57
HMG20AQ9NP66 AC245100.8-202ENST00000629247 1058 ntBASIC18.59■□□□□ 0.57
HMG20AQ9NP66 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.59■□□□□ 0.57
HMG20AQ9NP66 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 AC005082.1-201ENST00000413042 2259 ntBASIC18.58■□□□□ 0.57
HMG20AQ9NP66 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20AQ9NP66 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms