Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LIN28AQ9H9Z2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
LIN28AQ9H9Z2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN28AQ9H9Z2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN28AQ9H9Z2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.71■□□□□ 0.75
LIN28AQ9H9Z2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 AC003102.1-202ENST00000563394 1796 ntBASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 KRT19P1-201ENST00000405746 1186 ntBASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LIN28AQ9H9Z2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 AC016769.1-201ENST00000409132 1010 ntBASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIN28AQ9H9Z2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIN28AQ9H9Z2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIN28AQ9H9Z2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIN28AQ9H9Z2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms