Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 AC093484.2-201ENST00000580996 2166 ntBASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VIPAS39Q9H9C1 BX005040.4-201ENST00000637145 1518 ntBASIC21.08■□□□□ 0.96
VIPAS39Q9H9C1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
VIPAS39Q9H9C1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 AC005082.1-201ENST00000413042 2259 ntBASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 AC010980.1-201ENST00000587192 1142 ntBASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VIPAS39Q9H9C1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VIPAS39Q9H9C1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
VIPAS39Q9H9C1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 RARRES2P2-201ENST00000394842 485 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 pRNA.6-201ENST00000610482 90 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 pRNA.5-201ENST00000612139 90 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 pRNA.11-201ENST00000618423 90 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 pRNA.13-201ENST00000619112 90 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms