Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 CYP2T3P-201ENST00000601990 817 ntBASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 FAM21FP-204ENST00000608637 956 ntBASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNDIG1Q9H7V2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 GCSHP5-201ENST00000443090 522 ntBASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNDIG1Q9H7V2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 AC026366.1-201ENST00000488803 879 ntBASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 UNC93B5-201ENST00000530315 699 ntBASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 AL589743.5-201ENST00000616611 1050 ntBASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNDIG1Q9H7V2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 AC073648.6-201ENST00000641589 218 ntBASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNDIG1Q9H7V2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 UNC93B4-201ENST00000505679 747 ntBASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SYNDIG1Q9H7V2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNDIG1Q9H7V2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNDIG1Q9H7V2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms