Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 RNF165-205ENST00000588679 2904 ntBASIC20.66■□□□□ 0.9
VPS11Q9H270 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VPS11Q9H270 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS11Q9H270 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.66■□□□□ 0.9
VPS11Q9H270 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS11Q9H270 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS11Q9H270 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.65■□□□□ 0.9
VPS11Q9H270 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.65■□□□□ 0.9
VPS11Q9H270 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.65■□□□□ 0.9
VPS11Q9H270 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.65■□□□□ 0.9
VPS11Q9H270 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
VPS11Q9H270 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VPS11Q9H270 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS11Q9H270 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS11Q9H270 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
VPS11Q9H270 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
VPS11Q9H270 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
VPS11Q9H270 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS11Q9H270 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS11Q9H270 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS11Q9H270 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS11Q9H270 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.64■□□□□ 0.89
VPS11Q9H270 AP001330.3-201ENST00000520123 633 ntBASIC20.64■□□□□ 0.89
VPS11Q9H270 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS11Q9H270 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 AL512408.1-201ENST00000569378 2000 ntBASIC20.64■□□□□ 0.89
VPS11Q9H270 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS11Q9H270 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS11Q9H270 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VPS11Q9H270 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.64■□□□□ 0.89
VPS11Q9H270 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VPS11Q9H270 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
VPS11Q9H270 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.63■□□□□ 0.89
VPS11Q9H270 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
VPS11Q9H270 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VPS11Q9H270 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS11Q9H270 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS11Q9H270 MIR572-201ENST00000384983 95 ntBASIC20.63■□□□□ 0.89
VPS11Q9H270 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.63■□□□□ 0.89
VPS11Q9H270 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.63■□□□□ 0.89
VPS11Q9H270 AC106739.1-201ENST00000617035 715 ntBASIC20.63■□□□□ 0.89
VPS11Q9H270 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS11Q9H270 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS11Q9H270 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VPS11Q9H270 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VPS11Q9H270 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS11Q9H270 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.62■□□□□ 0.89
VPS11Q9H270 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 FP700111.2-201ENST00000619190 1892 ntBASIC20.62■□□□□ 0.89
VPS11Q9H270 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
VPS11Q9H270 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS11Q9H270 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms