Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
ALX4Q9H161 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.33■□□□□ 0.37
ALX4Q9H161 FP700111.2-201ENST00000619190 1892 ntBASIC17.33■□□□□ 0.37
ALX4Q9H161 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.33■□□□□ 0.37
ALX4Q9H161 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALX4Q9H161 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
ALX4Q9H161 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.33■□□□□ 0.37
ALX4Q9H161 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ALX4Q9H161 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.33■□□□□ 0.36
ALX4Q9H161 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 SERBP1P1-201ENST00000396021 1160 ntBASIC17.33■□□□□ 0.36
ALX4Q9H161 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.33■□□□□ 0.36
ALX4Q9H161 AC010141.3-201ENST00000456659 717 ntBASIC17.33■□□□□ 0.36
ALX4Q9H161 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.33■□□□□ 0.36
ALX4Q9H161 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ALX4Q9H161 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ALX4Q9H161 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.33■□□□□ 0.36
ALX4Q9H161 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALX4Q9H161 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ALX4Q9H161 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.32■□□□□ 0.36
ALX4Q9H161 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.32■□□□□ 0.36
ALX4Q9H161 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 AC024257.2-201ENST00000549699 147 ntBASIC17.32■□□□□ 0.36
ALX4Q9H161 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.32■□□□□ 0.36
ALX4Q9H161 AC241377.3-202ENST00000626088 1088 ntBASIC17.32■□□□□ 0.36
ALX4Q9H161 AC241585.3-202ENST00000628937 1088 ntBASIC17.32■□□□□ 0.36
ALX4Q9H161 AC245100.8-202ENST00000629247 1058 ntBASIC17.32■□□□□ 0.36
ALX4Q9H161 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ALX4Q9H161 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
ALX4Q9H161 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 AP004607.7-201ENST00000527152 1677 ntBASIC17.32■□□□□ 0.36
ALX4Q9H161 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
ALX4Q9H161 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALX4Q9H161 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.31■□□□□ 0.36
ALX4Q9H161 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.31■□□□□ 0.36
ALX4Q9H161 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 AC135279.3-201ENST00000610945 1311 ntBASIC17.31■□□□□ 0.36
ALX4Q9H161 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ALX4Q9H161 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.31■□□□□ 0.36
ALX4Q9H161 MIR638-201ENST00000385237 100 ntBASIC17.31■□□□□ 0.36
ALX4Q9H161 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.31■□□□□ 0.36
ALX4Q9H161 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALX4Q9H161 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
ALX4Q9H161 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.31■□□□□ 0.36
ALX4Q9H161 AC092171.4-201ENST00000609130 632 ntBASIC17.31■□□□□ 0.36
ALX4Q9H161 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX4Q9H161 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX4Q9H161 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX4Q9H161 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX4Q9H161 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ALX4Q9H161 pRNA.6-201ENST00000610482 90 ntBASIC17.3■□□□□ 0.36
ALX4Q9H161 pRNA.5-201ENST00000612139 90 ntBASIC17.3■□□□□ 0.36
ALX4Q9H161 pRNA.11-201ENST00000618423 90 ntBASIC17.3■□□□□ 0.36
ALX4Q9H161 pRNA.13-201ENST00000619112 90 ntBASIC17.3■□□□□ 0.36
ALX4Q9H161 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX4Q9H161 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms