Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 EEF1DP3-203ENST00000566025 782 ntBASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 MIR4767-201ENST00000582827 78 ntBASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 AC233992.3-201ENST00000607491 485 ntBASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP3-1Q9BYR8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 FXN-202ENST00000396364 980 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 AC131281.2-201ENST00000520478 145 ntBASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 IGHV3-19-201ENST00000521488 291 ntBASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 AC018445.3-201ENST00000624177 1945 ntBASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-1Q9BYR8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 AL356441.2-201ENST00000443009 864 ntBASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 AC053503.5-201ENST00000601508 636 ntBASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-1Q9BYR8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms