Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC24A5-202ENST00000449382 1388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-3Q9BYR6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC074138.1-201ENST00000611182 1303 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 NRIR-202ENST00000414795 506 ntTSL 3 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC002127.1-201ENST00000421305 225 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AL121601.2-201ENST00000438019 707 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC098614.3-201ENST00000438957 440 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 OR2A20P-203ENST00000498397 1268 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 OR5H3P-201ENST00000502817 919 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 SNCA-207ENST00000502987 731 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 OR7E13P-201ENST00000526052 910 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AL049838.1-201ENST00000563647 981 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC005495.1-201ENST00000586611 1211 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC009237.12-201ENST00000604755 742 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC091965.4-201ENST00000607691 587 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 Z98043.1-201ENST00000624123 339 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 AC119674.1-220ENST00000641502 1048 ntBASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-3Q9BYR6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
KRTAP3-3Q9BYR6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC006480.2-201ENST00000609770 1337 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 RNU6-761P-201ENST00000384148 107 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 MTCO1P17-201ENST00000411522 491 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 RPL12P28-201ENST00000430852 489 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AP003717.3-201ENST00000544832 1180 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC021851.1-201ENST00000608537 1082 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 CNTNAP3P5-201ENST00000611892 888 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC010776.3-201ENST00000617349 424 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC083865.1-201ENST00000636634 831 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01686-201ENST00000566297 1376 ntBASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-3Q9BYR6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CCL28-203ENST00000513525 1518 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC112492.1-201ENST00000449607 712 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AL353637.1-201ENST00000451571 732 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC022294.1-201ENST00000460993 865 ntTSL 3 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 MTCYBP35-201ENST00000503630 1137 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AL356057.1-201ENST00000533798 831 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC023389.2-201ENST00000580031 955 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AP000919.1-202ENST00000581139 1264 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AP002884.5-201ENST00000595053 1132 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC011492.1-201ENST00000600023 315 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms