Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 AL136162.1-201ENST00000607711 1078 ntBASIC17.62■□□□□ 0.41
NICN1Q9BSH3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NICN1Q9BSH3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 AC008764.7-201ENST00000593779 1081 ntBASIC17.61■□□□□ 0.41
NICN1Q9BSH3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
NICN1Q9BSH3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 AC135279.3-201ENST00000610945 1311 ntBASIC17.6■□□□□ 0.41
NICN1Q9BSH3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.6■□□□□ 0.41
NICN1Q9BSH3 AL162377.1-201ENST00000618844 1793 ntBASIC17.6■□□□□ 0.41
NICN1Q9BSH3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NICN1Q9BSH3 AIRN-201ENST00000601203 4374 ntBASIC17.6■□□□□ 0.41
NICN1Q9BSH3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 TSPY26P-201ENST00000476365 1326 ntBASIC17.59■□□□□ 0.41
NICN1Q9BSH3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NICN1Q9BSH3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NICN1Q9BSH3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.58■□□□□ 0.41
NICN1Q9BSH3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NICN1Q9BSH3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 AC099791.1-201ENST00000416440 715 ntBASIC17.58■□□□□ 0.4
NICN1Q9BSH3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NICN1Q9BSH3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms