Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
PAAF1Q9BRP4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 PNMA6B-201ENST00000538162 1200 ntBASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 AC073648.6-201ENST00000641589 218 ntBASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 AC087633.2-202ENST00000565166 1439 ntBASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.04■■□□□ 1.12
PAAF1Q9BRP4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 AC092368.3-202ENST00000574180 1591 ntBASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PAAF1Q9BRP4 AL024507.2-201ENST00000606070 2574 ntBASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 GCSHP5-201ENST00000443090 522 ntBASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 AC093827.2-201ENST00000512654 315 ntBASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PAAF1Q9BRP4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
PAAF1Q9BRP4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22■■□□□ 1.11
PAAF1Q9BRP4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PAAF1Q9BRP4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PAAF1Q9BRP4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms