Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VRK1Q99986 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VRK1Q99986 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
VRK1Q99986 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK1Q99986 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.06■□□□□ 0.48
VRK1Q99986 AC007322.1-201ENST00000426983 750 ntBASIC18.06■□□□□ 0.48
VRK1Q99986 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.06■□□□□ 0.48
VRK1Q99986 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 AC231657.2-201ENST00000624556 255 ntBASIC18.06■□□□□ 0.48
VRK1Q99986 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VRK1Q99986 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VRK1Q99986 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.06■□□□□ 0.48
VRK1Q99986 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VRK1Q99986 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.05■□□□□ 0.48
VRK1Q99986 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
VRK1Q99986 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VRK1Q99986 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 KRT18P20-201ENST00000548986 1279 ntBASIC18.05■□□□□ 0.48
VRK1Q99986 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.05■□□□□ 0.48
VRK1Q99986 AC053503.5-201ENST00000601508 636 ntBASIC18.05■□□□□ 0.48
VRK1Q99986 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.05■□□□□ 0.48
VRK1Q99986 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.05■□□□□ 0.48
VRK1Q99986 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VRK1Q99986 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VRK1Q99986 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VRK1Q99986 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK1Q99986 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.04■□□□□ 0.48
VRK1Q99986 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK1Q99986 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VRK1Q99986 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VRK1Q99986 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VRK1Q99986 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.04■□□□□ 0.48
VRK1Q99986 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.04■□□□□ 0.48
VRK1Q99986 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 AL109923.1-201ENST00000618799 583 ntBASIC18.04■□□□□ 0.48
VRK1Q99986 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VRK1Q99986 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VRK1Q99986 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.04■□□□□ 0.48
VRK1Q99986 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.04■□□□□ 0.48
VRK1Q99986 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VRK1Q99986 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.03■□□□□ 0.48
VRK1Q99986 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.03■□□□□ 0.48
VRK1Q99986 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.03■□□□□ 0.48
VRK1Q99986 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.03■□□□□ 0.48
VRK1Q99986 EEF1DP3-203ENST00000566025 782 ntBASIC18.03■□□□□ 0.48
VRK1Q99986 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
VRK1Q99986 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.03■□□□□ 0.48
VRK1Q99986 AC008175.2-201ENST00000612840 297 ntBASIC18.03■□□□□ 0.48
VRK1Q99986 AC120498.10-201ENST00000621827 505 ntBASIC18.03■□□□□ 0.48
VRK1Q99986 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms