Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCC1Q96S66 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCC1Q96S66 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCC1Q96S66 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 AL139246.5-201ENST00000606645 996 ntBASIC17.22■□□□□ 0.35
CLCC1Q96S66 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCC1Q96S66 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCC1Q96S66 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLCC1Q96S66 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCC1Q96S66 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
CLCC1Q96S66 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CLCC1Q96S66 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.21■□□□□ 0.34
CLCC1Q96S66 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.21■□□□□ 0.34
CLCC1Q96S66 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms