Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 AL512625.2-201ENST00000417533 625 ntBASIC15.98■□□□□ 0.15
DUX3Q96PT4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DUX3Q96PT4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DUX3Q96PT4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DUX3Q96PT4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
DUX3Q96PT4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.97■□□□□ 0.15
DUX3Q96PT4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.97■□□□□ 0.15
DUX3Q96PT4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.97■□□□□ 0.15
DUX3Q96PT4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX3Q96PT4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 CDV3P1-201ENST00000471403 739 ntBASIC15.96■□□□□ 0.15
DUX3Q96PT4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
DUX3Q96PT4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX3Q96PT4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.96■□□□□ 0.14
DUX3Q96PT4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
DUX3Q96PT4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
DUX3Q96PT4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.96■□□□□ 0.14
DUX3Q96PT4 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.95■□□□□ 0.14
DUX3Q96PT4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 AL162412.1-201ENST00000567129 965 ntBASIC15.95■□□□□ 0.14
DUX3Q96PT4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 AC092118.2-201ENST00000613495 667 ntBASIC15.95■□□□□ 0.14
DUX3Q96PT4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX3Q96PT4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX3Q96PT4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 KRT17P1-201ENST00000399211 1546 ntBASIC15.94■□□□□ 0.14
DUX3Q96PT4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 LSM12P1-201ENST00000411836 588 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms