Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 MIR5787-201ENST00000611784 55 ntBASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 AC027702.1-201ENST00000563810 1770 ntBASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 SLC25A24-204ENST00000569674 2357 ntBASIC19.18■□□□□ 0.66
MS4A4EQ96PG1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 AP005212.1-201ENST00000581547 1997 ntBASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 AC007322.3-201ENST00000426526 701 ntBASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MS4A4EQ96PG1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 AC010536.3-201ENST00000620306 533 ntBASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.16■□□□□ 0.66
MS4A4EQ96PG1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 AC073314.1-201ENST00000568729 2216 ntBASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 CDV3P1-201ENST00000471403 739 ntBASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A4EQ96PG1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.66
MS4A4EQ96PG1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A4EQ96PG1 LINC01006-201ENST00000333319 2292 ntBASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms