Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 Z92544.1-202ENST00000571933 1220 ntBASIC15.5■□□□□ 0.07
AP1S3Q96PC3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 AC241377.3-202ENST00000626088 1088 ntBASIC15.5■□□□□ 0.07
AP1S3Q96PC3 AC241585.3-202ENST00000628937 1088 ntBASIC15.5■□□□□ 0.07
AP1S3Q96PC3 AC245100.8-202ENST00000629247 1058 ntBASIC15.5■□□□□ 0.07
AP1S3Q96PC3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S3Q96PC3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 AC010997.5-201ENST00000609182 354 ntBASIC15.49■□□□□ 0.07
AP1S3Q96PC3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 AC087239.1-201ENST00000622671 572 ntBASIC15.49■□□□□ 0.07
AP1S3Q96PC3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S3Q96PC3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 AC068587.7-201ENST00000641602 218 ntBASIC15.48■□□□□ 0.07
AP1S3Q96PC3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
AP1S3Q96PC3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 AL117332.1-201ENST00000622628 974 ntBASIC15.47■□□□□ 0.07
AP1S3Q96PC3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 AC133637.1-201ENST00000624115 1537 ntBASIC15.47■□□□□ 0.07
AP1S3Q96PC3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP1S3Q96PC3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.46■□□□□ 0.07
AP1S3Q96PC3 AC087289.5-201ENST00000586076 3175 ntBASIC15.46■□□□□ 0.07
AP1S3Q96PC3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S3Q96PC3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.46■□□□□ 0.07
AP1S3Q96PC3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S3Q96PC3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP1S3Q96PC3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms