Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 AC079089.2-201ENST00000531211 1277 ntBASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 AC004854.2-201ENST00000608450 1441 ntBASIC21.02■□□□□ 0.96
GRAMD1AQ96CP6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
GRAMD1AQ96CP6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
GRAMD1AQ96CP6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.95
GRAMD1AQ96CP6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GRAMD1AQ96CP6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 AC010141.3-201ENST00000456659 717 ntBASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GRAMD1AQ96CP6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 AC006970.2-201ENST00000450065 779 ntBASIC21■□□□□ 0.95
GRAMD1AQ96CP6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
GRAMD1AQ96CP6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GRAMD1AQ96CP6 AC073314.1-201ENST00000568729 2216 ntBASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 AC104771.1-201ENST00000603335 964 ntBASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GRAMD1AQ96CP6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRAMD1AQ96CP6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRAMD1AQ96CP6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.97■□□□□ 0.95
GRAMD1AQ96CP6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRAMD1AQ96CP6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms