Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 AC010542.4-201ENST00000563151 1910 ntBASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM43Q96BQ3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM43Q96BQ3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 AC116050.2-201ENST00000612102 1779 ntBASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM43Q96BQ3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 AL355355.2-201ENST00000442321 338 ntBASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 MIR6786-201ENST00000616843 113 ntBASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 AC087633.2-202ENST00000565166 1439 ntBASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM43Q96BQ3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM43Q96BQ3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TRIM43Q96BQ3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.52■■□□□ 1.19
TRIM43Q96BQ3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 AF186192.3-201ENST00000583427 947 ntBASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 AC145285.6-201ENST00000604632 637 ntBASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms