Protein–RNA interactions for Protein: Q96A29

SLC35C1, GDP-fucose transporter 1, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35C1Q96A29 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 AL162430.1-201ENST00000480705 870 ntBASIC22.32■■□□□ 1.16
SLC35C1Q96A29 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 AC137761.2-201ENST00000561729 223 ntBASIC22.32■■□□□ 1.16
SLC35C1Q96A29 AC145350.3-201ENST00000569033 163 ntBASIC22.32■■□□□ 1.16
SLC35C1Q96A29 AC010536.3-201ENST00000620306 533 ntBASIC22.32■■□□□ 1.16
SLC35C1Q96A29 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SLC35C1Q96A29 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 KRT18P11-201ENST00000435214 1283 ntBASIC22.31■■□□□ 1.16
SLC35C1Q96A29 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 AC020907.5-201ENST00000624372 1936 ntBASIC22.31■■□□□ 1.16
SLC35C1Q96A29 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLC35C1Q96A29 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.3■■□□□ 1.16
SLC35C1Q96A29 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 TERF1P5-201ENST00000477545 1207 ntBASIC22.3■■□□□ 1.16
SLC35C1Q96A29 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 MIR5787-201ENST00000611784 55 ntBASIC22.3■■□□□ 1.16
SLC35C1Q96A29 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLC35C1Q96A29 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.29■■□□□ 1.16
SLC35C1Q96A29 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 AC007322.3-201ENST00000426526 701 ntBASIC22.29■■□□□ 1.16
SLC35C1Q96A29 AC006015.1-201ENST00000429970 570 ntBASIC22.29■■□□□ 1.16
SLC35C1Q96A29 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 MFSD11-216ENST00000590393 1141 ntBASIC22.29■■□□□ 1.16
SLC35C1Q96A29 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 MIR2861-201ENST00000636310 90 ntBASIC22.29■■□□□ 1.16
SLC35C1Q96A29 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLC35C1Q96A29 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC35C1Q96A29 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC35C1Q96A29 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC35C1Q96A29 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms