Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 SAPCD2P1-201ENST00000395413 1184 ntBASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SYNE2Q8WXH0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 IL9RP2-201ENST00000423948 1312 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 MRPL3P1-201ENST00000400109 1033 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 HLA-G-203ENST00000376818 1127 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 NUS1P1-201ENST00000446295 882 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC091304.2-201ENST00000564639 760 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 AC055717.3-201ENST00000622967 595 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 HLA-A-201ENST00000376802 1334 ntBASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC8.47□□□□□ -1.05
SYNE2Q8WXH0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 AC100791.3-201ENST00000617619 330 ntBASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SYNE2Q8WXH0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 AC007274.1-201ENST00000439805 662 ntBASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 AL662844.1-201ENST00000546340 181 ntBASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC8.46□□□□□ -1.06
SYNE2Q8WXH0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AL732292.2-201ENST00000609649 430 ntBASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 GK-202ENST00000378941 458 ntTSL 3 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms