Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDND2Q8NHS1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLDND2Q8NHS1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 TSPY20P-201ENST00000450910 630 ntBASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 RNF165-205ENST00000588679 2904 ntBASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDND2Q8NHS1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 AL162412.1-201ENST00000567129 965 ntBASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDND2Q8NHS1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 BX276092.2-201ENST00000417668 665 ntBASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDND2Q8NHS1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 TMEM191A-211ENST00000637163 1067 ntBASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDND2Q8NHS1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 RARRES2P4-201ENST00000514074 484 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms