Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PJA1Q8NG27 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PJA1Q8NG27 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.14■□□□□ 0.98
PJA1Q8NG27 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PJA1Q8NG27 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.14■□□□□ 0.98
PJA1Q8NG27 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PJA1Q8NG27 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PJA1Q8NG27 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PJA1Q8NG27 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PJA1Q8NG27 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PJA1Q8NG27 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.14■□□□□ 0.97
PJA1Q8NG27 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 AC003102.1-202ENST00000563394 1796 ntBASIC21.13■□□□□ 0.97
PJA1Q8NG27 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
PJA1Q8NG27 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PJA1Q8NG27 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PJA1Q8NG27 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
PJA1Q8NG27 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.11■□□□□ 0.97
PJA1Q8NG27 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PJA1Q8NG27 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.11■□□□□ 0.97
PJA1Q8NG27 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.11■□□□□ 0.97
PJA1Q8NG27 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.11■□□□□ 0.97
PJA1Q8NG27 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 AC087742.1-201ENST00000575880 1738 ntBASIC21.11■□□□□ 0.97
PJA1Q8NG27 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PJA1Q8NG27 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.1■□□□□ 0.97
PJA1Q8NG27 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 AC133561.5-201ENST00000635547 218 ntBASIC21.1■□□□□ 0.97
PJA1Q8NG27 AL049637.2-201ENST00000641778 930 ntBASIC21.1■□□□□ 0.97
PJA1Q8NG27 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PJA1Q8NG27 AC139530.1-201ENST00000575312 1977 ntBASIC21.1■□□□□ 0.97
PJA1Q8NG27 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PJA1Q8NG27 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
PJA1Q8NG27 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PJA1Q8NG27 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PJA1Q8NG27 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PJA1Q8NG27 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.09■□□□□ 0.97
PJA1Q8NG27 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms