Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRPF38AQ8NAV1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 GCSHP5-201ENST00000443090 522 ntBASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 PNMA6B-201ENST00000538162 1200 ntBASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 AC008403.3-201ENST00000598924 454 ntBASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRPF38AQ8NAV1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 RPS2P52-201ENST00000469610 820 ntBASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRPF38AQ8NAV1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC087633.2-202ENST00000565166 1439 ntBASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC093827.2-201ENST00000512654 315 ntBASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC073648.6-201ENST00000641589 218 ntBASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AC092368.3-202ENST00000574180 1591 ntBASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 AL117328.2-201ENST00000624617 1940 ntBASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRPF38AQ8NAV1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 UNC93B4-201ENST00000505679 747 ntBASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PRPF38AQ8NAV1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 AC142381.4-202ENST00000563973 229 ntBASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 AC244015.2-201ENST00000616358 1861 ntBASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PRPF38AQ8NAV1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.73■■□□□ 1.39
PRPF38AQ8NAV1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms