Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 SMUG1P1-201ENST00000590640 811 ntBASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 AC009237.3-201ENST00000393279 1427 ntBASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 AL512408.1-201ENST00000569378 2000 ntBASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC71LQ8N9Z2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC71LQ8N9Z2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC71LQ8N9Z2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC71LQ8N9Z2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 AC011484.1-201ENST00000377652 1995 ntBASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms