Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 AC083880.1-201ENST00000608266 535 ntBASIC18.27■□□□□ 0.52
CNEP1R1Q8N9A8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNEP1R1Q8N9A8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNEP1R1Q8N9A8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.27■□□□□ 0.51
CNEP1R1Q8N9A8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNEP1R1Q8N9A8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 MYC-209ENST00000641252 345 ntBASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CNEP1R1Q8N9A8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 KRT18P68-201ENST00000392293 1000 ntBASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 TMEM191A-211ENST00000637163 1067 ntBASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNEP1R1Q8N9A8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 Z98882.1-201ENST00000622160 2253 ntBASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
CNEP1R1Q8N9A8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CNEP1R1Q8N9A8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms