Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH20Q8N6Y1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH20Q8N6Y1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 AC116050.2-201ENST00000612102 1779 ntBASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 AC010980.2-201ENST00000587099 1412 ntBASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 AC100791.3-201ENST00000617619 330 ntBASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH20Q8N6Y1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDH20Q8N6Y1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH20Q8N6Y1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 MIPEPP3-201ENST00000412105 444 ntBASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms