Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 AC027702.1-201ENST00000563810 1770 ntBASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 CYP2T3P-201ENST00000601990 817 ntBASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAM1L1Q8N609 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAM1L1Q8N609 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 AC006128.1-201ENST00000624704 1661 ntBASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 AC087633.2-202ENST00000565166 1439 ntBASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAM1L1Q8N609 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 MIPEPP3-201ENST00000412105 444 ntBASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 PGM5P4-201ENST00000421970 445 ntBASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 AL355472.2-201ENST00000422958 438 ntBASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAM1L1Q8N609 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 KRT18P68-201ENST00000392293 1000 ntBASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 BX276092.2-201ENST00000417668 665 ntBASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAM1L1Q8N609 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms