Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEFF1Q8IYR6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEFF1Q8IYR6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 FAM210CP-201ENST00000445714 574 ntBASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 C2orf69P4-201ENST00000565394 541 ntBASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 AC116050.2-201ENST00000612102 1779 ntBASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 AC127496.7-201ENST00000625110 1798 ntBASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEFF1Q8IYR6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 GUSBP5-202ENST00000510805 1989 ntBASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 TSPY7P-201ENST00000431358 1114 ntBASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 LINC01023-201ENST00000606054 436 ntBASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 AL023875.1-201ENST00000640777 796 ntBASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TMEFF1Q8IYR6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEFF1Q8IYR6 RPS2P55-201ENST00000397318 883 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms