Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SMC5Q8IY18 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SMC5Q8IY18 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMC5Q8IY18 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.68
SMC5Q8IY18 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 KRT19P1-201ENST00000405746 1186 ntBASIC25.51■■□□□ 1.67
SMC5Q8IY18 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMC5Q8IY18 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.51■■□□□ 1.67
SMC5Q8IY18 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMC5Q8IY18 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMC5Q8IY18 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMC5Q8IY18 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.5■■□□□ 1.67
SMC5Q8IY18 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SMC5Q8IY18 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMC5Q8IY18 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.49■■□□□ 1.67
SMC5Q8IY18 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 AC097381.1-201ENST00000429019 1296 ntBASIC25.48■■□□□ 1.67
SMC5Q8IY18 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 UBE2DNL-204ENST00000602536 740 ntBASIC25.48■■□□□ 1.67
SMC5Q8IY18 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SMC5Q8IY18 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMC5Q8IY18 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 AC092720.2-201ENST00000602388 1665 ntBASIC25.47■■□□□ 1.67
SMC5Q8IY18 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 AC099778.1-201ENST00000568593 1911 ntBASIC25.47■■□□□ 1.67
SMC5Q8IY18 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMC5Q8IY18 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms