Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 AP004607.4-201ENST00000530158 1459 ntBASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 EEF1DP3-203ENST00000566025 782 ntBASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MRPL55Q7Z7F7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 AL157384.1-201ENST00000445995 2473 ntBASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 AC008175.2-201ENST00000612840 297 ntBASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 PLK5-205ENST00000642079 1969 ntBASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.18□□□□□ -0.3
MRPL55Q7Z7F7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 PKD1P5-201ENST00000532415 10291 ntBASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 AC079140.4-201ENST00000507448 529 ntBASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 TPRG1LP1-201ENST00000598702 760 ntBASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms