Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LYSMD3Q7Z3D4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 CDV3P1-201ENST00000471403 739 ntBASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD3Q7Z3D4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 AL162412.1-201ENST00000567129 965 ntBASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 AL050303.2-201ENST00000619798 666 ntBASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD3Q7Z3D4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LYSMD3Q7Z3D4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
LYSMD3Q7Z3D4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LYSMD3Q7Z3D4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LYSMD3Q7Z3D4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
LYSMD3Q7Z3D4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LYSMD3Q7Z3D4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 FAM21FP-204ENST00000608637 956 ntBASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LYSMD3Q7Z3D4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 AC006970.2-201ENST00000450065 779 ntBASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LYSMD3Q7Z3D4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 ID1-201ENST00000376105 1233 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms