Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
NHLRC1Q6VVB1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 AC091799.1-201ENST00000422823 811 ntBASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.45■□□□□ 0.54
NHLRC1Q6VVB1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 AC245052.3-201ENST00000450182 901 ntBASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 MYCNOS-205ENST00000641950 531 ntBASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.44■□□□□ 0.54
NHLRC1Q6VVB1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 AC006015.1-201ENST00000429970 570 ntBASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 MIR5787-201ENST00000611784 55 ntBASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NHLRC1Q6VVB1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NHLRC1Q6VVB1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms