Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.05■■□□□ 1.12
DCLRE1AQ6PJP8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
DCLRE1AQ6PJP8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DCLRE1AQ6PJP8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
DCLRE1AQ6PJP8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 AC105020.6-201ENST00000621523 1217 ntBASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
DCLRE1AQ6PJP8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 AC060766.5-201ENST00000590539 871 ntBASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.03■■□□□ 1.12
DCLRE1AQ6PJP8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 LINC00565-201ENST00000562710 2331 ntBASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 AC026366.1-201ENST00000488803 879 ntBASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
DCLRE1AQ6PJP8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.02■■□□□ 1.11
DCLRE1AQ6PJP8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.02■■□□□ 1.11
DCLRE1AQ6PJP8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
DCLRE1AQ6PJP8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
DCLRE1AQ6PJP8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 AC087633.2-202ENST00000565166 1439 ntBASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DCLRE1AQ6PJP8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 BID-212ENST00000614949 1988 ntTSL 5 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 RPS2P52-201ENST00000469610 820 ntBASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 FBXW4P1-201ENST00000426721 2239 ntBASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22■■□□□ 1.11
DCLRE1AQ6PJP8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 372 ms