Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NTF6G-201ENST00000591094 616 ntBASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR1Q6PIV2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 AC004408.2-201ENST00000623613 2777 ntBASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 BX323043.1-201ENST00000641006 1765 ntBASIC21.35■■□□□ 1.01
FOXR1Q6PIV2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 KRT18P14-201ENST00000534205 1250 ntBASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXR1Q6PIV2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.33■■□□□ 1.01
FOXR1Q6PIV2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.33■■□□□ 1
FOXR1Q6PIV2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
FOXR1Q6PIV2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
FOXR1Q6PIV2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FOXR1Q6PIV2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
FOXR1Q6PIV2 AC116562.4-201ENST00000641316 2276 ntBASIC21.32■■□□□ 1
FOXR1Q6PIV2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
FOXR1Q6PIV2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FOXR1Q6PIV2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXR1Q6PIV2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.32■■□□□ 1
FOXR1Q6PIV2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.32■■□□□ 1
FOXR1Q6PIV2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.32■■□□□ 1
FOXR1Q6PIV2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
FOXR1Q6PIV2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXR1Q6PIV2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXR1Q6PIV2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXR1Q6PIV2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXR1Q6PIV2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FOXR1Q6PIV2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 AP000974.1-201ENST00000623909 2387 ntBASIC21.3■■□□□ 1
FOXR1Q6PIV2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXR1Q6PIV2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.3■■□□□ 1
FOXR1Q6PIV2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms