Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.92■□□□□ 0.94
CASC4Q6P4E1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 MIR638-201ENST00000385237 100 ntBASIC20.92■□□□□ 0.94
CASC4Q6P4E1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.92■□□□□ 0.94
CASC4Q6P4E1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 AC011484.1-201ENST00000377652 1995 ntBASIC20.91■□□□□ 0.94
CASC4Q6P4E1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 AC120498.10-201ENST00000621827 505 ntBASIC20.91■□□□□ 0.94
CASC4Q6P4E1 LINC02228-203ENST00000641970 1355 ntBASIC20.91■□□□□ 0.94
CASC4Q6P4E1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CASC4Q6P4E1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 AC027702.1-201ENST00000563810 1770 ntBASIC20.9■□□□□ 0.94
CASC4Q6P4E1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.9■□□□□ 0.94
CASC4Q6P4E1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CASC4Q6P4E1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CASC4Q6P4E1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
CASC4Q6P4E1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CASC4Q6P4E1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.89■□□□□ 0.94
CASC4Q6P4E1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 AC138907.5-202ENST00000569484 235 ntBASIC20.89■□□□□ 0.93
CASC4Q6P4E1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CASC4Q6P4E1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 AL391422.3-201ENST00000603791 2761 ntBASIC20.88■□□□□ 0.93
CASC4Q6P4E1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CASC4Q6P4E1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.87■□□□□ 0.93
CASC4Q6P4E1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms