Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 AC097658.1-201ENST00000475555 843 ntBASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 KRT18P6-201ENST00000555540 1265 ntBASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 AC121338.2-201ENST00000622535 1744 ntBASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 AC087633.2-202ENST00000565166 1439 ntBASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC30Q5VVM6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC30Q5VVM6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 AC083880.1-201ENST00000608266 535 ntBASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC30Q5VVM6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 AC105020.6-201ENST00000621523 1217 ntBASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCDC30Q5VVM6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC30Q5VVM6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 AC027702.1-201ENST00000563810 1770 ntBASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 PGM5P4-201ENST00000421970 445 ntBASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 CD99P1-205ENST00000527459 561 ntBASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC30Q5VVM6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms