Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCN1P1Q5VSP4 AL020996.1-203ENST00000536896 2307 ntBASIC18.55■□□□□ 0.56
LCN1P1Q5VSP4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 AC087289.5-201ENST00000586076 3175 ntBASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.54■□□□□ 0.56
LCN1P1Q5VSP4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 AL136162.1-201ENST00000607711 1078 ntBASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.53■□□□□ 0.56
LCN1P1Q5VSP4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 AC135279.3-201ENST00000610945 1311 ntBASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 AC024257.2-201ENST00000549699 147 ntBASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 AC020907.5-201ENST00000624372 1936 ntBASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCN1P1Q5VSP4 AC027702.1-201ENST00000563810 1770 ntBASIC18.52■□□□□ 0.55
LCN1P1Q5VSP4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
LCN1P1Q5VSP4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.52■□□□□ 0.55
LCN1P1Q5VSP4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.52■□□□□ 0.55
LCN1P1Q5VSP4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCN1P1Q5VSP4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 BX005040.4-201ENST00000637145 1518 ntBASIC18.5■□□□□ 0.55
LCN1P1Q5VSP4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms