Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC026271.2-201ENST00000428091 497 ntBASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 CCDC92B-201ENST00000575506 885 ntBASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF1Q5TC12 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 KRT18P14-201ENST00000534205 1250 ntBASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF1Q5TC12 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATPAF1Q5TC12 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 AC003102.1-202ENST00000563394 1796 ntBASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PCDHAC2-203ENST00000615316 3011 ntBASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 RARRES2P6-201ENST00000567333 442 ntBASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.76■□□□□ 0.43
ATPAF1Q5TC12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 AC034268.1-201ENST00000441047 882 ntBASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 AC079140.4-201ENST00000507448 529 ntBASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF1Q5TC12 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms