Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARS2Q5ST30 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.86■■□□□ 1.09
VARS2Q5ST30 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PNMA6B-201ENST00000538162 1200 ntBASIC21.85■■□□□ 1.09
VARS2Q5ST30 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 AP006294.2-201ENST00000641667 209 ntBASIC21.85■■□□□ 1.09
VARS2Q5ST30 FBXW4P1-201ENST00000426721 2239 ntBASIC21.85■■□□□ 1.09
VARS2Q5ST30 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARS2Q5ST30 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.85■■□□□ 1.09
VARS2Q5ST30 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
VARS2Q5ST30 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 AC092368.3-202ENST00000574180 1591 ntBASIC21.84■■□□□ 1.09
VARS2Q5ST30 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.84■■□□□ 1.09
VARS2Q5ST30 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.84■■□□□ 1.09
VARS2Q5ST30 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 AC008403.3-201ENST00000598924 454 ntBASIC21.84■■□□□ 1.09
VARS2Q5ST30 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.84■■□□□ 1.09
VARS2Q5ST30 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARS2Q5ST30 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.84■■□□□ 1.09
VARS2Q5ST30 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
VARS2Q5ST30 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
VARS2Q5ST30 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VARS2Q5ST30 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.83■■□□□ 1.09
VARS2Q5ST30 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.83■■□□□ 1.09
VARS2Q5ST30 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VARS2Q5ST30 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VARS2Q5ST30 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.83■■□□□ 1.08
VARS2Q5ST30 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
VARS2Q5ST30 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VARS2Q5ST30 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.83■■□□□ 1.08
VARS2Q5ST30 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 RPS2P52-201ENST00000469610 820 ntBASIC21.82■■□□□ 1.08
VARS2Q5ST30 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 AC073648.6-201ENST00000641589 218 ntBASIC21.82■■□□□ 1.08
VARS2Q5ST30 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 Z98882.1-201ENST00000622160 2253 ntBASIC21.82■■□□□ 1.08
VARS2Q5ST30 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.82■■□□□ 1.08
VARS2Q5ST30 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VARS2Q5ST30 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VARS2Q5ST30 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARS2Q5ST30 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARS2Q5ST30 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 GCSHP5-201ENST00000443090 522 ntBASIC21.81■■□□□ 1.08
VARS2Q5ST30 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VARS2Q5ST30 C2orf69P4-201ENST00000565394 541 ntBASIC21.81■■□□□ 1.08
VARS2Q5ST30 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.81■■□□□ 1.08
VARS2Q5ST30 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VARS2Q5ST30 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.8■■□□□ 1.08
VARS2Q5ST30 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARS2Q5ST30 PGM5P4-201ENST00000421970 445 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms