Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 AP000997.3-201ENST00000623333 2250 ntBASIC10.31□□□□□ -0.76
LINC01554Q52M75 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 HES4-204ENST00000484667 667 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 RPS2-202ENST00000526522 924 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC01554Q52M75 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 AC099398.1-201ENST00000567919 2776 ntBASIC10.3□□□□□ -0.76
LINC01554Q52M75 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 MIR639-201ENST00000384974 98 ntBASIC10.3□□□□□ -0.76
LINC01554Q52M75 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 HES4-202ENST00000428771 1040 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 ANOS2P-203ENST00000472227 1816 ntBASIC10.3□□□□□ -0.76
LINC01554Q52M75 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
LINC01554Q52M75 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01554Q52M75 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 GPX1-201ENST00000419349 1106 ntBASIC10.29□□□□□ -0.76
LINC01554Q52M75 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 AC133552.2-201ENST00000619106 1032 ntBASIC10.29□□□□□ -0.76
LINC01554Q52M75 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.29□□□□□ -0.76
LINC01554Q52M75 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms