Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.14■□□□□ 0.65
SYPL1Q16563 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SYPL1Q16563 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SYPL1Q16563 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYPL1Q16563 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SYPL1Q16563 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 AL121603.2-201ENST00000557373 2117 ntBASIC19.13■□□□□ 0.65
SYPL1Q16563 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SYPL1Q16563 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.13■□□□□ 0.65
SYPL1Q16563 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.13■□□□□ 0.65
SYPL1Q16563 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.13■□□□□ 0.65
SYPL1Q16563 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.13■□□□□ 0.65
SYPL1Q16563 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.13■□□□□ 0.65
SYPL1Q16563 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYPL1Q16563 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SYPL1Q16563 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
SYPL1Q16563 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.12■□□□□ 0.65
SYPL1Q16563 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SYPL1Q16563 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.12■□□□□ 0.65
SYPL1Q16563 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SYPL1Q16563 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYPL1Q16563 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.12■□□□□ 0.65
SYPL1Q16563 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.11■□□□□ 0.65
SYPL1Q16563 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SYPL1Q16563 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.11■□□□□ 0.65
SYPL1Q16563 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SYPL1Q16563 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SYPL1Q16563 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SYPL1Q16563 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SYPL1Q16563 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
SYPL1Q16563 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.11■□□□□ 0.65
SYPL1Q16563 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SYPL1Q16563 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SYPL1Q16563 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.1■□□□□ 0.65
SYPL1Q16563 PCDHAC2-203ENST00000615316 3011 ntBASIC19.1■□□□□ 0.65
SYPL1Q16563 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.1■□□□□ 0.65
SYPL1Q16563 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SYPL1Q16563 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 KRT18P20-201ENST00000548986 1279 ntBASIC19.1■□□□□ 0.65
SYPL1Q16563 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.1■□□□□ 0.65
SYPL1Q16563 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.1■□□□□ 0.65
SYPL1Q16563 KRT18P61-201ENST00000585825 1298 ntBASIC19.1■□□□□ 0.65
SYPL1Q16563 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.1■□□□□ 0.65
SYPL1Q16563 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.1■□□□□ 0.65
SYPL1Q16563 AC116050.2-201ENST00000612102 1779 ntBASIC19.1■□□□□ 0.65
SYPL1Q16563 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.1■□□□□ 0.65
SYPL1Q16563 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYPL1Q16563 AL512408.1-201ENST00000569378 2000 ntBASIC19.1■□□□□ 0.65
SYPL1Q16563 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.1■□□□□ 0.65
SYPL1Q16563 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
SYPL1Q16563 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.09■□□□□ 0.65
SYPL1Q16563 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYPL1Q16563 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYPL1Q16563 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms