Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.1■□□□□ 0.17
CFHR3Q02985 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.1■□□□□ 0.17
CFHR3Q02985 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.1■□□□□ 0.17
CFHR3Q02985 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.1■□□□□ 0.17
CFHR3Q02985 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.1■□□□□ 0.17
CFHR3Q02985 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.1■□□□□ 0.17
CFHR3Q02985 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 CYP21A1P-202ENST00000354927 1481 ntBASIC16.1■□□□□ 0.17
CFHR3Q02985 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CFHR3Q02985 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CFHR3Q02985 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CFHR3Q02985 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.09■□□□□ 0.17
CFHR3Q02985 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.09■□□□□ 0.17
CFHR3Q02985 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 MCRIP2P1-201ENST00000394346 511 ntBASIC16.09■□□□□ 0.17
CFHR3Q02985 AC073210.2-201ENST00000430369 194 ntBASIC16.09■□□□□ 0.17
CFHR3Q02985 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.09■□□□□ 0.17
CFHR3Q02985 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.09■□□□□ 0.17
CFHR3Q02985 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.09■□□□□ 0.17
CFHR3Q02985 CYP2T3P-201ENST00000601990 817 ntBASIC16.09■□□□□ 0.17
CFHR3Q02985 AC092118.2-201ENST00000613495 667 ntBASIC16.09■□□□□ 0.17
CFHR3Q02985 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.09■□□□□ 0.17
CFHR3Q02985 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.09■□□□□ 0.17
CFHR3Q02985 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CFHR3Q02985 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CFHR3Q02985 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CFHR3Q02985 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.08■□□□□ 0.17
CFHR3Q02985 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CFHR3Q02985 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CFHR3Q02985 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.08■□□□□ 0.16
CFHR3Q02985 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CFHR3Q02985 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.08■□□□□ 0.16
CFHR3Q02985 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CFHR3Q02985 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CFHR3Q02985 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CFHR3Q02985 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFHR3Q02985 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CFHR3Q02985 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.07■□□□□ 0.16
CFHR3Q02985 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CFHR3Q02985 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 BX276092.2-201ENST00000417668 665 ntBASIC16.07■□□□□ 0.16
CFHR3Q02985 AC069152.1-201ENST00000438030 544 ntBASIC16.07■□□□□ 0.16
CFHR3Q02985 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.07■□□□□ 0.16
CFHR3Q02985 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.07■□□□□ 0.16
CFHR3Q02985 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 MIR4758-201ENST00000577688 71 ntBASIC16.07■□□□□ 0.16
CFHR3Q02985 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CFHR3Q02985 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.07■□□□□ 0.16
CFHR3Q02985 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.07■□□□□ 0.16
CFHR3Q02985 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.07■□□□□ 0.16
CFHR3Q02985 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFHR3Q02985 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.06■□□□□ 0.16
CFHR3Q02985 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.06■□□□□ 0.16
CFHR3Q02985 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CFHR3Q02985 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFHR3Q02985 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.06■□□□□ 0.16
CFHR3Q02985 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.06■□□□□ 0.16
CFHR3Q02985 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.06■□□□□ 0.16
CFHR3Q02985 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CFHR3Q02985 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms