Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL20P78556 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL20P78556 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.21■□□□□ 0.19
CCL20P78556 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL20P78556 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.21■□□□□ 0.18
CCL20P78556 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL20P78556 AC007613.1-201ENST00000572811 2597 ntBASIC16.21■□□□□ 0.18
CCL20P78556 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL20P78556 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.21■□□□□ 0.18
CCL20P78556 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL20P78556 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CCL20P78556 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.21■□□□□ 0.18
CCL20P78556 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL20P78556 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
CCL20P78556 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL20P78556 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL20P78556 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL20P78556 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCL20P78556 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL20P78556 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL20P78556 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL20P78556 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL20P78556 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCL20P78556 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CCL20P78556 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 KRT18P60-201ENST00000312876 1297 ntBASIC16.19■□□□□ 0.18
CCL20P78556 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL20P78556 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL20P78556 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
CCL20P78556 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL20P78556 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL20P78556 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL20P78556 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCL20P78556 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL20P78556 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCL20P78556 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL20P78556 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CCL20P78556 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.17■□□□□ 0.18
CCL20P78556 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL20P78556 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms