Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.58■□□□□ 0.57
RPS4XP62701 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS4XP62701 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
RPS4XP62701 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RPS4XP62701 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4XP62701 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4XP62701 AC245052.3-201ENST00000450182 901 ntBASIC18.58■□□□□ 0.56
RPS4XP62701 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RPS4XP62701 AC104187.1-201ENST00000607510 612 ntBASIC18.58■□□□□ 0.56
RPS4XP62701 AC073111.5-205ENST00000641717 521 ntBASIC18.58■□□□□ 0.56
RPS4XP62701 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4XP62701 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS4XP62701 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RPS4XP62701 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.58■□□□□ 0.56
RPS4XP62701 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPS4XP62701 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPS4XP62701 AC020907.5-201ENST00000624372 1936 ntBASIC18.57■□□□□ 0.56
RPS4XP62701 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RPS4XP62701 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.57■□□□□ 0.56
RPS4XP62701 AC120498.10-201ENST00000621827 505 ntBASIC18.57■□□□□ 0.56
RPS4XP62701 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RPS4XP62701 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPS4XP62701 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
RPS4XP62701 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4XP62701 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.56■□□□□ 0.56
RPS4XP62701 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.56■□□□□ 0.56
RPS4XP62701 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 AP001160.3-201ENST00000601484 763 ntBASIC18.56■□□□□ 0.56
RPS4XP62701 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.56■□□□□ 0.56
RPS4XP62701 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4XP62701 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
RPS4XP62701 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RPS4XP62701 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.56■□□□□ 0.56
RPS4XP62701 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPS4XP62701 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RPS4XP62701 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 KRT18P11-201ENST00000435214 1283 ntBASIC18.55■□□□□ 0.56
RPS4XP62701 CDCA4P2-201ENST00000441182 718 ntBASIC18.55■□□□□ 0.56
RPS4XP62701 AC026185.1-201ENST00000445748 174 ntBASIC18.55■□□□□ 0.56
RPS4XP62701 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.55■□□□□ 0.56
RPS4XP62701 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.55■□□□□ 0.56
RPS4XP62701 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.55■□□□□ 0.56
RPS4XP62701 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPS4XP62701 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.55■□□□□ 0.56
RPS4XP62701 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.54■□□□□ 0.56
RPS4XP62701 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.54■□□□□ 0.56
RPS4XP62701 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPS4XP62701 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPS4XP62701 KRT18P20-201ENST00000548986 1279 ntBASIC18.54■□□□□ 0.56
RPS4XP62701 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPS4XP62701 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms