Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LSM6P62312 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LSM6P62312 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
LSM6P62312 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.06■□□□□ 0.48
LSM6P62312 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.06■□□□□ 0.48
LSM6P62312 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM6P62312 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM6P62312 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LSM6P62312 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 AC007322.3-201ENST00000426526 701 ntBASIC18.05■□□□□ 0.48
LSM6P62312 AC026271.2-201ENST00000428091 497 ntBASIC18.05■□□□□ 0.48
LSM6P62312 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.05■□□□□ 0.48
LSM6P62312 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
LSM6P62312 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
LSM6P62312 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM6P62312 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
LSM6P62312 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 LINC01006-201ENST00000333319 2292 ntBASIC18.04■□□□□ 0.48
LSM6P62312 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.04■□□□□ 0.48
LSM6P62312 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 CDV3P1-201ENST00000471403 739 ntBASIC18.04■□□□□ 0.48
LSM6P62312 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LSM6P62312 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM6P62312 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM6P62312 RARRES2P6-201ENST00000567333 442 ntBASIC18.04■□□□□ 0.48
LSM6P62312 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM6P62312 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.04■□□□□ 0.48
LSM6P62312 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LSM6P62312 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM6P62312 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 AC073314.1-201ENST00000568729 2216 ntBASIC18.03■□□□□ 0.48
LSM6P62312 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LSM6P62312 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LSM6P62312 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.03■□□□□ 0.48
LSM6P62312 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LSM6P62312 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 KRT18P5-201ENST00000436075 1291 ntBASIC18.03■□□□□ 0.48
LSM6P62312 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.03■□□□□ 0.48
LSM6P62312 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.03■□□□□ 0.48
LSM6P62312 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.03■□□□□ 0.48
LSM6P62312 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.03■□□□□ 0.48
LSM6P62312 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LSM6P62312 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LSM6P62312 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.03■□□□□ 0.48
LSM6P62312 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.03■□□□□ 0.48
LSM6P62312 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LSM6P62312 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSM6P62312 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.02■□□□□ 0.48
LSM6P62312 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.02■□□□□ 0.48
LSM6P62312 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LSM6P62312 AC020907.5-201ENST00000624372 1936 ntBASIC18.02■□□□□ 0.48
LSM6P62312 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms